I2660

identifier	I2660
alternative_identifiers	['GENSCOT29']
country	Great Britain
continent	Europe
region	British Isles
culture	Scotland_N
epoch	Neolithic
group	NEBI
comment	-
latitude	56.40999984741211
longitude	-5.4710001945495605
sex	M
site	Distillery Cave, Oban, Argyll and Bute, Scotland
site_detail	-
mt_hg	U5a2+16194
ychr_hg	I2a2a1a1a
year_from	-3513
year_to	-3352
date_detail	3513-3352 calBCE (4631±29 BP, SUERC-68703)
bp	4631±29
c14_lab_code	SUERC-68703
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	110.18299865722656
sequence_source	bam
reference	Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link	http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps	-
mitopathos	[{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '5460A', 'position': 5460, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND2'], 'diseases': ['AD / PD / LHON']}]