I2741

FASTA

Metadata

Reference

Data

identifier I2741
alternative_identifiers ['GEN_20', 'Grave 49']
country Hungary
continent Europe
region Pannonia
culture Bell Beaker
epoch Copper Age
group BBC
comment -
latitude 47.38322448730469
longitude 19.020252227783203
sex M
site Szigetszentmiklós,Felső Ürge-hegyi dűlő
site_detail -
mt_hg H1+16189
ychr_hg I2a1a1
year_from -2457
year_to -2153
date_detail 2457-2153 calBCE (3835±35 BP, Poz-83641)
bp 3835±35
c14_lab_code Poz-83641
c14_sample_tag True
c14_layer_tag -
avg_coverage 648.156005859375
sequence_source bam
reference Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps -
mitopathos [{'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '3010A', 'position': 3010, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR2'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine / high altitude disease risk factor']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}]