I3082

FASTA

Metadata

Reference

Data

identifier I3082
alternative_identifiers ['Burial F4']
country Great Britain
continent Europe
region British Isles
culture England_MBA
epoch Bronze Age
group BABI
comment -
latitude 50.91920471191406
longitude -2.0154409408569336
sex M
site Canada Farm, Sixpenny Handley, Dorset, England
site_detail -
mt_hg H1an1a
ychr_hg R1b1a1a2a1a2c
year_from -1498
year_to -1394
date_detail 1498-1394 calBCE (3157±25 BP, NZA-34643)
bp 3157±25
c14_lab_code NZA-34643
c14_sample_tag True
c14_layer_tag -
avg_coverage 199.90699768066406
sequence_source bam
reference Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps -
mitopathos [{'allele': '3010A', 'position': 3010, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR2'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine / high altitude disease risk factor']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '4454C', 'position': 4454, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TM'], 'diseases': ['Possible contributor to mito dysfunction / hypertension']}]