I3719

FASTA

Metadata

Reference

Data

identifier I3719
alternative_identifiers ['Grave 102']
country Ukraine
continent Europe
region Pontic steppe
culture Ukraine_Neolithic
epoch Neolithic
group NEUk
comment outlier
latitude 48.90999984741211
longitude 33.7599983215332
sex M
site Dereivka
site_detail Site I
mt_hg H1
ychr_hg I2a2a
year_from -4949
year_to -4799
date_detail 4949-4799 calBCE (5995±25 BP, PSUAMS-2303)
bp 5995±25
c14_lab_code PSUAMS-2303
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB22652
ychr_snps ['I:CTS2536:14352669G->A', 'I:CTS7469:17497181C->A', 'I:PF3800:21402723A->G', 'I:CTS646:6926038T->A', 'I2a2a:P223:16699334C->G', 'I2a2a:P221:8353707C->A', 'I2a2:P218:17493630T->G']
mitopathos [{'allele': '3010A', 'position': 3010, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR2'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine / high altitude disease risk factor']}]