I4070
FASTA
Metadata
Reference
Data
| identifier | I4070 |
|---|---|
| alternative_identifiers | ['skeleton 230 barrow I-M7'] |
| country | The Netherlands |
| continent | Europe |
| region | western Europe |
| culture | Netherlands_BA |
| epoch | Bronze Age |
| group | BANl |
| comment | - |
| latitude | 52.73356246948242 |
| longitude | 5.096182823181152 |
| sex | M |
| site | De Tuithoorn, Oostwoud, Noord-Holland |
| site_detail | - |
| mt_hg | U5a1b1a |
| ychr_hg | R1b1a1a2a1a1 |
| year_from | -1880 |
| year_to | -1657 |
| date_detail | 1880-1657 calBCE (3440±40 BP, GrA-17225) |
| bp | 3440±40 |
| c14_lab_code | GrA-17225 |
| c14_sample_tag | True |
| c14_layer_tag | - |
| avg_coverage | 138.93299865722656 |
| sequence_source | bam |
| reference | Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link) |
| data_link | http://www.ebi.ac.uk/ena/data/view/PRJEB23635 |
| ychr_snps | - |
| mitopathos | [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '16270T', 'position': 16270, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}] |