I4075

FASTA

Metadata

Reference

Data

identifier I4075
alternative_identifiers ['skeleton 243-M15']
country The Netherlands
continent Europe
region western Europe
culture Bell Beaker
epoch Copper Age
group BBC
comment -
latitude 52.73356246948242
longitude 5.096182823181152
sex F
site De Tuithoorn, Oostwoud, Noord-Holland
site_detail -
mt_hg H5a1
ychr_hg -
year_from -2118
year_to -1937
date_detail 2118-1937 calBCE (3635±20 BP, PSUAMS-2337)
bp 3635±20
c14_lab_code PSUAMS-2337
c14_sample_tag True
c14_layer_tag -
avg_coverage 418.88299560546875
sequence_source bam
reference Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps -
mitopathos [{'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '4336C', 'position': 4336, 'status': 'Unclear', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TQ'], 'diseases': ['ADPD / Hearing Loss & Migraine / autism spectrum / intellectual disability']}]