I4436

FASTA

Metadata

Reference

Data

identifier	I4436
alternative_identifiers	['ZVEJ14']
country	Latvia
continent	Europe
region	Baltic
culture	Hunter-Gatherer
epoch	Mesolithic
group	HGE
comment	-
latitude	56.279998779296875
longitude	25.1299991607666
sex	M
site	Zvejnieki
site_detail	-
mt_hg	U4a1
ychr_hg	R1b1a1a(xR1b1a1a2)
year_from	-4260
year_to	-4050
date_detail	4260-4050 calBCE (5335±30 BP, PSUAMS-2233)
bp	5335±30
c14_lab_code	PSUAMS-2233
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	-
sequence_source	bam
reference	Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB22652
ychr_snps	['R:F459:18017528G->T', 'R:L1347:22818334C->T', 'R:M613:7133986G->C', 'R1:CTS2565:14366723C->T', 'R1:CTS5611:16394489T->G', 'R1:L875:16742224A->G', 'R:CTS207:2810583A->G', 'R:CTS8311:17930099C->A', 'R:M651:9889199G->A', 'R:M718:17334694G->T', 'R:P280:21843090C->G', 'R1b1a:CTS4244:15510064T->G', 'R1b1a:L754:22889018G->A', 'R1b1a:L761:16773870A->G', 'R1:CTS3321:14829196C->T', 'R1:CTS997:7132713G->A', 'R1:M306:22750583C->A', 'R1:P231:9989615A->G', 'R1:P294:7570822G->C', 'R:CTS7876:17722802G->A', 'R:F63:7177189G->A', 'R:F652:23631629C->A', 'R:FGC1168:15667208G->C', 'R:L1225:22733758C->G', 'R:M734:18066156C->T', 'R:M799:23134896C->T', 'R:CTS2913:14561760A->G', 'R:F765:24360964G->A', 'R1b1a1a:CTS3876:15239181G->C', 'R1b1a1a:L502:19020340G->C', 'R1b1a:PF6271:23984056G->A', 'R1b:M343:2887824C->A', 'R1b1a1a:CTS5577:16376495A->C', 'R1b1a1a:CTS9018:18617596C->T', 'R1b1a1a:FGC57:7759944G->A', 'R1b1a1a:PF6463:16183412C->A', 'R1b1a:A702:10038192G->A', 'R1b1a:PF6263:21159055C->A', 'R1b1:CTS2134:14193384G->A', 'R1b1:CTS2229:14226692T->A', 'R1b1a1a:PF6451:14116584T->A', 'R1b1a:CTS3063:14637352T->C', 'R1b1a:CTS8436:18026855G->A', 'R1b1a:FGC41:7900883C->A', 'R1b1a:L1345:21558298G->T', 'R1:F102:7854412A->G', 'R1b1a1a:PF6475:17986687C->A']
mitopathos	-