I4438

FASTA

Metadata

Reference

Data

identifier	I4438
alternative_identifiers	['ZVEJ16']
country	Latvia
continent	Europe
region	Baltic
culture	Hunter-Gatherer
epoch	Mesolithic
group	HGE
comment	-
latitude	56.279998779296875
longitude	25.1299991607666
sex	M
site	Zvejnieki
site_detail	-
mt_hg	U4b1a2
ychr_hg	I2a1
year_from	-5462
year_to	-5220
date_detail	5462-5220 calBCE (6335±35 BP, PSUAMS-2235)
bp	6335±35
c14_lab_code	PSUAMS-2235
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	-
sequence_source	bam
reference	Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB22652
ychr_snps	['I:CTS48:2688442T->A', 'I:CTS1800:14073053G->A', 'I:CTS2387:14286853T->C', 'I:CTS2514:14337364T->C', 'I:CTS3384:14884659A->C', 'I:CTS4088:15389836T->C', 'I:CTS4209:15479899T->A', 'I:CTS4273:15536870C->T', 'I:CTS6265:16780748C->G', 'I:CTS7469:17497181C->A', 'I:CTS7502:17511797A->G', 'I:CTS7831:17692855T->A', 'I:CTS8420:18018313C->A', 'I:CTS8963:18582617C->T', 'I:CTS10941:22845794A->G', 'I:CTS11540:23156725C->T', 'I:FGC2412:21689728A->G', 'I:FGC2413:8262092C->T', 'I:FGC2415:13835003T->C', 'I:FI2:8382265C->G', 'I:L503:21359407C->G', 'I:L578:8267857G->A', 'I:L758:8536868C->G', 'I:PF3627.2:6662712C->T', 'I:PF3640:7681156T->A', 'I:PF3641:7688470T->C', 'I:PF3661:8484606C->A', 'I:PF3665:8643763A->G', 'I:FI4:8873160G->T', 'I:M258:15023364T->C', 'I:CTS88:2723755G->A', 'I:CTS3517:14986989T->G', 'I:CTS5946:16567253A->G', 'I:CTS8742:18172947A->G', 'I:CTS8876:18257568G->A', 'I:CTS9860:19104986G->A', 'I:CTS11979:23401471C->T', 'I:FGC2416:7642823G->T', 'I:PF3814:21839183A->G', 'I:PF3815:21841289G->T', 'I:PF3817:21939618G->A', 'I2a1:P37.2:14491684T->C', 'I2:L68:18700150C->T', 'I:CTS7540:17525137A->G', 'I:FI3:8485677C->A', 'I:CTS5650:16415916A->G', 'I:CTS8345:17949402C->G', 'I:PF3837:22573702G->A', 'I:CTS7329:17424807C->T', 'I:CTS9269:18789763C->T', 'I:L751:18394743A->G', 'I:PF3803:21452125A->G', 'I:FGC2417:10051801G->A']
mitopathos	-