I4441

FASTA

Metadata

Reference

Data

identifier I4441
alternative_identifiers ['ZVEJ22']
country Latvia
continent Europe
region Baltic
culture Hunter-Gatherer
epoch Mesolithic
group HGE
comment -
latitude 56.279998779296875
longitude 25.1299991607666
sex M
site Zvejnieki
site_detail -
mt_hg U5a1c
ychr_hg I2a2a1b
year_from -4837
year_to -4713
date_detail 4837-4713 calBCE (5900±30 BP, PSUAMS-2265)
bp 5900±30
c14_lab_code PSUAMS-2265
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB22652
ychr_snps ['I:CTS674:6943522C->T', 'I:CTS1800:14073053G->A', 'I:CTS2387:14286853T->C', 'I:CTS2514:14337364T->C', 'I:CTS2536:14352669G->A', 'I:CTS4088:15389836T->C', 'I:CTS4209:15479899T->A', 'I:CTS4273:15536870C->T', 'I:CTS6265:16780748C->G', 'I:CTS7469:17497181C->A', 'I:CTS7831:17692855T->A', 'I:CTS8420:18018313C->A', 'I:CTS8963:18582617C->T', 'I:CTS10058:19233673A->G', 'I:CTS10941:22845794A->G', 'I:CTS11540:23156725C->T', 'I:FGC2412:21689728A->G', 'I:FGC2413:8262092C->T', 'I:FGC2415:13835003T->C', 'I:FI2:8382265C->G', 'I:L503:21359407C->G', 'I:L578:8267857G->A', 'I:L758:8536868C->G', 'I:L1197:14974451C->T', 'I:PF3627.2:6662712C->T', 'I:PF3640:7681156T->A', 'I:PF3641:7688470T->C', 'I:PF3660:8466652G->A', 'I:PF3661:8484606C->A', 'I:PF3794:21067903C->T', 'I:FI4:8873160G->T', 'I2:PF3664:8567995G->A', 'I:CTS8876:18257568G->A', 'I:CTS9860:19104986G->A', 'I:CTS11979:23401471C->T', 'I:FGC2416:7642823G->T', 'I:L41:19048602G->A', 'I:L772:15615533C->A', 'I:P212:3545070T->A', 'I:PF3815:21841289G->T', 'I:PF3817:21939618G->A', 'I:PF3836:22525421T->G', 'I:CTS646:6926038T->A', 'I:CTS4848:15862842C->T', 'I:FI3:8485677C->A', 'I:PF3742:16354708G->A', 'I2a2a:L34:7716262A->C', 'I2a2:P217:7628484C->T', 'I2a2:L35:22725379C->A', 'I2a2:L368:6931594C->T', 'I2a2a1b:CTS10100:19255890G->A', 'I2a2a:P220:24475669G->T', 'I2a2:L37:17516123T->C', 'I2a2:L181:19077754G->T', 'I2a2:P218:17493630T->G', 'I:CTS9618:18992894T->C', 'I:FGC2417:10051801G->A', 'I2a2a1b:CTS10057:19232160C->T', 'I2a2a:L36:17570599C->T', 'I2a2:P216:13992338C->G', 'I:PF3665:8643763A->Ghet']
mitopathos -