I4551

FASTA

Metadata

Reference

Data

identifier I4551
alternative_identifiers ['ZVEJ4']
country Latvia
continent Europe
region Baltic
culture Hunter-Gatherer
epoch Mesolithic
group HGE
comment -
latitude 56.279998779296875
longitude 25.1299991607666
sex M
site Zvejnieki
site_detail -
mt_hg U5a2c3
ychr_hg I2a2a1
year_from -5775
year_to -5666
date_detail 5775-5666 calBCE (6845±25 BP, PSUAMS-2836)
bp 6845±25
c14_lab_code PSUAMS-2836
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB22652
ychr_snps ['I:CTS1800:14073053G->A', 'I:CTS2193:14214481G->T', 'I:CTS2514:14337364T->C', 'I:CTS2536:14352669G->A', 'I:CTS3384:14884659A->C', 'I:CTS4088:15389836T->C', 'I:CTS4209:15479899T->A', 'I:CTS4273:15536870C->T', 'I:CTS6265:16780748C->G', 'I:CTS7469:17497181C->A', 'I:CTS7502:17511797A->G', 'I:CTS7831:17692855T->A', 'I:CTS8420:18018313C->A', 'I:CTS10941:22845794A->G', 'I:FGC2412:21689728A->G', 'I:FGC2413:8262092C->T', 'I:FGC2415:13835003T->C', 'I:FI2:8382265C->G', 'I:L578:8267857G->A', 'I:L758:8536868C->G', 'I:L1197:14974451C->T', 'I:PF3627.2:6662712C->T', 'I:PF3640:7681156T->A', 'I:PF3641:7688470T->C', 'I:PF3660:8466652G->A', 'I:PF3661:8484606C->A', 'I:PF3665:8643763A->G', 'I:PF3794:21067903C->T', 'I2:PF3664:8567995G->A', 'I:CTS88:2723755G->A', 'I:CTS5946:16567253A->G', 'I:CTS8876:18257568G->A', 'I:CTS9860:19104986G->A', 'I:FGC2416:7642823G->T', 'I:L847:23154034C->T', 'I:PF3800:21402723A->G', 'I:PF3814:21839183A->G', 'I:PF3817:21939618G->A', 'I2:L68:18700150C->T', 'I:CTS646:6926038T->A', 'I:CTS4848:15862842C->T', 'I:FI3:8485677C->A', 'I:L755:8465165C->T', 'I2a2a1:CTS9183:18732197A->G', 'I2a2:L35:22725379C->A', 'I2a2:L368:6931594C->T', 'I2a2:L37:17516123T->C', 'I2a2:L181:19077754G->T', 'I2a2:P218:17493630T->G', 'I:CTS9618:18992894T->C']
mitopathos -