I4553

FASTA

Metadata

Reference

Data

identifier I4553
alternative_identifiers ['ZVEJ7']
country Latvia
continent Europe
region Baltic
culture Hunter-Gatherer
epoch Mesolithic
group HGE
comment -
latitude 56.279998779296875
longitude 25.1299991607666
sex M
site Zvejnieki
site_detail -
mt_hg U5a1c
ychr_hg I2a2a1
year_from -5482
year_to -5375
date_detail 5482-5375 calBCE (6470±25 BP, PSUAMS-2838)
bp 6470±25
c14_lab_code PSUAMS-2838
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB22652
ychr_snps ['I:CTS1800:14073053G->A', 'I:CTS3384:14884659A->C', 'I:CTS4088:15389836T->C', 'I:CTS4209:15479899T->A', 'I:CTS7469:17497181C->A', 'I:CTS7502:17511797A->G', 'I:CTS7831:17692855T->A', 'I:CTS8420:18018313C->A', 'I:CTS8963:18582617C->T', 'I:CTS10058:19233673A->G', 'I:FGC2412:21689728A->G', 'I:FGC2413:8262092C->T', 'I:FGC2415:13835003T->C', 'I:FI2:8382265C->G', 'I:L578:8267857G->A', 'I:L758:8536868C->G', 'I:PF3627.2:6662712C->T', 'I2:PF3664:8567995G->A', 'I:CTS8876:18257568G->A', 'I:CTS9860:19104986G->A', 'I:PF3814:21839183A->G', 'I2a2a1:CTS9183:18732197A->G', 'I2a2:P217:7628484C->T', 'I2a2:L37:17516123T->C', 'I2a2:L181:19077754G->T']
mitopathos -