I4596

FASTA

Metadata

Reference

Data

identifier I4596
alternative_identifiers ['ZVEJ9']
country Latvia
continent Europe
region Baltic
culture Hunter-Gatherer
epoch Mesolithic
group HGE
comment -
latitude 56.279998779296875
longitude 25.1299991607666
sex M
site Zvejnieki
site_detail -
mt_hg U5a2d
ychr_hg I2a2a1b
year_from -6061
year_to -5990
date_detail 6061-5990 calBCE (7150±25 BP, PSUAMS-2839)
bp 7150±25
c14_lab_code PSUAMS-2839
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB22652
ychr_snps ['I:CTS48:2688442T->A', 'I:CTS674:6943522C->T', 'I:CTS1800:14073053G->A', 'I:CTS2514:14337364T->C', 'I:CTS2536:14352669G->A', 'I:CTS3384:14884659A->C', 'I:CTS4209:15479899T->A', 'I:CTS4273:15536870C->T', 'I:CTS5764:16471254A->G', 'I:CTS6265:16780748C->G', 'I:CTS7469:17497181C->A', 'I:CTS7502:17511797A->G', 'I:CTS7831:17692855T->A', 'I:CTS8420:18018313C->A', 'I:CTS8963:18582617C->T', 'I:CTS10058:19233673A->G', 'I:CTS10941:22845794A->G', 'I:CTS11540:23156725C->T', 'I:FGC2413:8262092C->T', 'I:FGC2415:13835003T->C', 'I:FI2:8382265C->G', 'I:L503:21359407C->G', 'I:L578:8267857G->A', 'I:L758:8536868C->G', 'I:L1197:14974451C->T', 'I:PF3627.2:6662712C->T', 'I:PF3640:7681156T->A', 'I:PF3641:7688470T->C', 'I:PF3661:8484606C->A', 'I:PF3794:21067903C->T', 'I:CTS6231:16751000C->T', 'I:FI4:8873160G->T', 'I2:PF3664:8567995G->A', 'I:CTS5946:16567253A->G', 'I:CTS8876:18257568G->A', 'I:CTS9860:19104986G->A', 'I:CTS11979:23401471C->T', 'I:FGC2416:7642823G->T', 'I:L847:23154034C->T', 'I:P38:14484379A->C', 'I:P212:3545070T->A', 'I:PF3797:21130059A->G', 'I:PF3800:21402723A->G', 'I:PF3814:21839183A->G', 'I:PF3815:21841289G->T', 'I:PF3817:21939618G->A', 'I:PF3829:22458740A->G', 'I:PF3836:22525421T->G', 'I2a:L460:7879415A->C', 'I2:L68:18700150C->T', 'I:CTS4848:15862842C->T', 'I:CTS7540:17525137A->G', 'I:CTS7593:17548890G->A', 'I:FI3:8485677C->A', 'I:CTS5650:16415916A->G', 'I:CTS3383:14884646C->T', 'I:L755:8465165C->T', 'I2a2a1:CTS9183:18732197A->G', 'I2a2a:P222:18888200C->G', 'I2a2:P217:7628484C->T', 'I:CTS9269:18789763C->T', 'I:PF3666:8728974T->G', 'I2a2:L35:22725379C->A', 'I2a2:L368:6931594C->T', 'I2a2a:P223:16699334C->G', 'I2a2a:P221:8353707C->A', 'I2a2:L37:17516123T->C', 'I2a2:L181:19077754G->T', 'I2a2:P218:17493630T->G', 'I:CTS9618:18992894T->C', 'I2a2a1b:CTS10057:19232160C->T', 'I2a2a:M223:21717307G->A', 'I:FGC2412:21689728A->Ghet', 'I2a2a:L622:13718315C->Ahet']
mitopathos -