I5072

FASTA

Metadata

Reference

Data

identifier	I5072
alternative_identifiers	['KG2']
country	Croatia
continent	Europe
region	Balkans
culture	Cardial Ware
epoch	Neolithic
group	NEBA
comment	-
latitude	44.81999969482422
longitude	13.640000343322754
sex	M
site	Kargadur
site_detail	-
mt_hg	H7c
ychr_hg	G2a2a1
year_from	-5641
year_to	-5560
date_detail	5641-5560 calBCE (6685±20 BP, UCIAMS-174935)
bp	6685±20
c14_lab_code	UCIAMS-174935
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	-
sequence_source	bam
reference	Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB22652
ychr_snps	['G2a:F3088:20813445G->A', 'G2a:F4086:7727677C->T', 'G2a:M3393:21493984G->T', 'G2:CTS10089:19248446G->A', 'G2:F1239:8482393C->T', 'G2:F1393:8719593G->A', 'G2:F3198:21401188G->T', 'G2:F3220:21637589G->C', 'G2:F3344:22697266G->A', 'G2:L89:7978725C->T', 'G2:M3579:21147058A->G', 'G2:P287:22072097G->T', 'G:CTS34:2681740G->A', 'G:CTS692:6955839A->G', 'G:CTS1013:7145960C->T', 'G:CTS2357:14273557C->T', 'G:CTS4761:15802681C->T', 'G:CTS9011:18615020A->T', 'G:CTS10026:19215139A->T', 'G:CTS10723:22730922C->G', 'G:CTS11228:23023554C->A', 'G:CTS11331:23074190A->G', 'G:CTS11529:23151673T->C', 'G:CTS11911:23346582A->C', 'G:CTS13035:28783924C->A', 'G:F1383:8700380C->T', 'G:F1551:9448354A->G', 'G:L116:14989721C->G', 'G:L522:17533325A->C', 'G:M3450:6931141C->G', 'G:M3472:7899682T->C', 'G:M3473:7927218C->T', 'G:M3479:8231862G->C', 'G:M3480:8327892T->A', 'G:M3482:8454233G->A', 'G:M3485:8563874C->T', 'G:M3628:23793740C->A', 'G:PF2918:13679469G->A', 'G:PF2952:14577177G->A', 'G:PF3134:15275200C->G', 'G:Z3262:13676268G->A', 'G2:CTS4264:15528792T->C', 'G2:CTS6742:17088129G->C', 'G2:F1647:9907842G->T', 'G2:F2319:16903051A->T', 'G2:F3226:21663882C->A', 'G2:M3465:7571775G->T', 'G2:PF2909:13205148A->G', 'G:CTS373:6716150T->C', 'G:CTS995:7132348G->C', 'G:CTS1612:13987230A->G', 'G:CTS2016.1:14155765G->A', 'G:CTS2125:14190447A->G', 'G:CTS4101:15397649A->G', 'G:CTS5317:16203361G->C', 'G:CTS5504:16325291T->C', 'G:CTS5640:16408569G->A', 'G:CTS6483:16929270C->T', 'G:CTS10721:22729194C->T', 'G:CTS11294:23059496G->A', 'G:M3266:8422993T->A', 'G:M3274:8865637G->A', 'G:M3464:7537950C->T', 'G:M3481:8387539G->A', 'G:M3585:21412501G->A', 'G:Page94:2846401C->T', 'G:PF2956:14993358A->G', 'G:U12:14639427A->C', 'G2a:F1980:15660640C->T', 'G:CTS9707:19030998C->A', 'G:CTS12654:28658660G->T', 'G:M3487:8602816G->C', 'G:M3595:21671839C->T', 'G2a2a1:PF3170:18090604G->A', 'G2a2a:PF3147:7738069G->A', 'G2a2a:PF3159:14815695C->G', 'G2a2a:PF3168:17572142T->C', 'G2a2a:PF3181:21808944C->A', 'G2a2a:PF3184:22576860C->T', 'G:CTS827:7038432C->G', 'G2a2a:PF3149:7943188A->G', 'G2a2a:Z6178:7245721G->A', 'G2a2a1:S15710:14254785T->G', 'G:CTS10393:19434150G->T', 'G:M3248:7565637G->A', 'G2a2a:PF3166:16735582T->G', 'G:CTS2174:14207268T->C', 'G:CTS8717:18162022T->C', 'G2a2a:PF3180:21600446A->T', 'G2a2a:Z6281:15393669A->C', 'G2a:CTS211:2812741C->T']
mitopathos	-