I5116
FASTA
Metadata
Reference
Data
| identifier | I5116 |
|---|---|
| alternative_identifiers | ['grave 1', 'HUNG847'] |
| country | Hungary |
| continent | Europe |
| region | Pannonia |
| culture | Hungary_LCA |
| epoch | Copper Age |
| group | CAHu |
| comment | - |
| latitude | 47.80989074707031 |
| longitude | 20.889266967773438 |
| sex | F |
| site | Mezőcsát-Hörcsögös |
| site_detail | - |
| mt_hg | W |
| ychr_hg | - |
| year_from | -3400 |
| year_to | -3000 |
| date_detail | 3400-3000 BCE |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | - |
| avg_coverage | 9.192890167236328 |
| sequence_source | bam |
| reference | Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link) |
| data_link | http://www.ebi.ac.uk/ena/data/view/PRJEB23635 |
| ychr_snps | - |
| mitopathos | [{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '16093C', 'position': 16093, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome']}, {'allele': '5460A', 'position': 5460, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND2'], 'diseases': ['AD / PD / LHON']}] |