I5374

FASTA

Metadata

Reference

Data

identifier I5374
alternative_identifiers ['TP 2004.9/257']
country Great Britain
continent Europe
region British Isles
culture England_N
epoch Neolithic
group NEBI
comment -
latitude 51.27899932861328
longitude -2.743324041366577
sex M
site Totty Pot, Cheddar, Somerset, England
site_detail -
mt_hg H1c
ychr_hg CT
year_from -2830
year_to -2460
date_detail 2830-2460 calBCE (4008±39 BP, OxA-16460)
bp 4008±39
c14_lab_code OxA-16460
c14_sample_tag True
c14_layer_tag -
avg_coverage 243.93299865722656
sequence_source bam
reference Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps -
mitopathos [{'allele': '3010A', 'position': 3010, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR2'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine / high altitude disease risk factor']}]