I5526
FASTA
Metadata
Reference
Data
| identifier | I5526 |
|---|---|
| alternative_identifiers | ['F7806'] |
| country | Germany |
| continent | Europe |
| region | central Europe |
| culture | Bell Beaker |
| epoch | Copper Age |
| group | BBC |
| comment | 1d_rel_I5524 |
| latitude | 48.66299819946289 |
| longitude | 12.706999778747559 |
| sex | F |
| site | Landau an der Isar, Bavaria |
| site_detail | - |
| mt_hg | H72 |
| ychr_hg | - |
| year_from | -2500 |
| year_to | -2000 |
| date_detail | 2500-2000 BCE |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | - |
| avg_coverage | 751.6950073242188 |
| sequence_source | bam |
| reference | Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link) |
| data_link | http://www.ebi.ac.uk/ena/data/view/PRJEB23635 |
| ychr_snps | - |
| mitopathos | [{'allele': '16093C', 'position': 16093, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome']}, {'allele': '15927A', 'position': 15927, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['LHON / Multiple Sclerosis / DEAF1555 increased penetrance / CHD']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}] |