I5836
FASTA
Metadata
Reference
Data
identifier | I5836 |
---|---|
alternative_identifiers | ['FM 14-003'] |
country | Germany |
continent | Europe |
region | central Europe |
culture | Bell Beaker |
epoch | Copper Age |
group | BBC |
comment | - |
latitude | 49.65288543701172 |
longitude | 8.327681541442871 |
sex | F |
site | Worms-Herrnsheim, Rhineland-Palatinate |
site_detail | - |
mt_hg | H1b1+16362 |
ychr_hg | - |
year_from | -2500 |
year_to | -2000 |
date_detail | 2500-2000 BCE |
bp | - |
c14_lab_code | - |
c14_sample_tag | - |
c14_layer_tag | - |
avg_coverage | 138.79200744628906 |
sequence_source | bam |
reference | Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link) |
data_link | http://www.ebi.ac.uk/ena/data/view/PRJEB23635 |
ychr_snps | - |
mitopathos | [{'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '3010A', 'position': 3010, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR2'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine / high altitude disease risk factor']}, {'allele': '3796G', 'position': 3796, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-ND1'], 'diseases': ['Adult-Onset Dystonia']}] |