I5838
FASTA
Metadata
Reference
Data
| identifier | I5838 |
|---|---|
| alternative_identifiers | ['L11-S-488', 'MIR202-037-n105'] |
| country | Spain |
| continent | Europe |
| region | Iberia |
| culture | C_Iberia_CA |
| epoch | Copper Age |
| group | CAIB |
| comment | - |
| latitude | 42.33333206176758 |
| longitude | -3.5 |
| sex | M |
| site | El Mirador Cave, Atapuerca, Burgos |
| site_detail | - |
| mt_hg | K1a+195 |
| ychr_hg | I2a2a2a |
| year_from | -2900 |
| year_to | -2346 |
| date_detail | 2900-2346 BCE [2568-2346 calBCE (3950±30 BP, Beta-416457), 2857-2496 calBCE (4080±30 BP, Beta-416456), 2865-2575 calBCE (4110±30 BP, Beta-416458), 2900-2679 calBCE (4210±30 BP, Beta-416455), based on dates of other El Mirador samples) |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | True |
| avg_coverage | 261.0 |
| sequence_source | bam |
| reference | Lipson et al. 2017. Parallel palaeogenomic transects reveal complex genetic history of early European farmers. Nature, 551(7680), 368-372. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB22629 |
| ychr_snps | ['G2a2a1a2a:PF3237:17017831G->A;G2a2a1a2a:PF3238:17256431G->A;G2a2a1a2:L91:21645555G->C;G2a2a1:PF3170:18090604G->A;G2a2a:PF3147:7738069G->A;G2a2a:PF3159:14815695C->G;G2a2a:PF3168:17572142T->C;G2a2a:PF3181:21808944C->A;G2a2a:PF3184:22576860C->T;G2a2a:PF3185:22894488C->T;G2a:F2529:17571517A->G;G2a:PF3141:23973594T->G;G2:CTS4242:15507383T->C;G2:CTS7662:17597715C->T;G2:F3220:21637589G->C;G2:F3536:23768744C->T;G2:L89:7978725C->T;G2:M3579:21147058A->G;G2:PF3125:24485469C->T;G:CTS10026:19215139A->T;G:CTS1010:7143549C->T;G:CTS10706:22714204G->T;G:CTS10723:22730922C->G;G:CTS11185:22997377C->G;G:CTS11228:23023554C->A;G:CTS11529:23151673T->C;G:CTS12654:28658660G->T;G:CTS13035:28783924C->A;G:CTS2271:14243137C->T;G:CTS2357:14273557C->T;G:CTS2517:14338503C->T;G:CTS4101:15397649A->G;G:CTS4479:15667235G->A;G:CTS4749:15797043A->G;G:CTS4887:15888550C->T;G:CTS5640:16408569G->A;G:CTS5837:16499780T->A;G:CTS7092:17281783G->A;G:CTS7269:17393643T->C;G:CTS8023:17798903T->C;G:CTS827:7038432C->G;G:CTS9894:19124322A->T;G:F1383:8700380C->T;G:F1551:9448354A->G;G:L116:14989721C->G;G:L382:14469411C->A;G:L522:17533325A->C;G:M3264:8318375G->T;G:M3450:6931141C->G;G:M3466:7614386G->A;G:M3468:7744050T->C;G:M3471:7840218C->A;G:M3473:7927218C->T;G:M3474:7930724C->A;G:M3479:8231862G->C;G:M3481:8387539G->A;G:M3485:8563874C->T;G:M3486:8600158A->T;G:M3580:21162869C->G;G:M3585:21412501G->A;G:M3586:21447363A->G;G:M3599:21939157G->A;G:M3628:23793740C->A;G:P257:14432928G->A;G:PF2956:14993358A->G;G:PF3045:20823823C->T;G:PF3134:15275200C->G;G:S1435:13658486C->Ghet'] |
| mitopathos | - |
I5838
