I5875

FASTA

Metadata

Reference

Data

identifier I5875
alternative_identifiers ['Grave 53']
country Ukraine
continent Europe
region Pontic steppe
culture Ukraine_Neolithic
epoch Neolithic
group NEUk
comment -
latitude 48.90999984741211
longitude 33.7599983215332
sex M
site Dereivka
site_detail Site I
mt_hg U4a1
ychr_hg I2a2a1b
year_from -5291
year_to -5060
date_detail 5291-5060 calBCE (6210±25 BP, PSUAMS-2810)
bp 6210±25
c14_lab_code PSUAMS-2810
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203. (link)
data_link https://www.ebi.ac.uk/ena/data/view/PRJEB22652
ychr_snps ['I:CTS1800:14073053G->A', 'I:CTS2387:14286853T->C', 'I:CTS7469:17497181C->A', 'I:CTS7502:17511797A->G', 'I:CTS7831:17692855T->A', 'I:CTS8963:18582617C->T', 'I:FGC2412:21689728A->G', 'I:FGC2415:13835003T->C', 'I:L578:8267857G->A', 'I:PF3627.2:6662712C->T', 'I:PF3640:7681156T->A', 'I:PF3641:7688470T->C', 'I:PF3661:8484606C->A', 'I:PF3665:8643763A->G', 'I:PF3794:21067903C->T', 'I:CTS8742:18172947A->G', 'I:PF3817:21939618G->A', 'I2a2a1:CTS9183:18732197A->G', 'I2a2a1b:CTS10100:19255890G->A', 'I2a2:L37:17516123T->C', 'I:CTS9618:18992894T->C']
mitopathos -