I5884

FASTA

Metadata

Reference

Data

identifier	I5884
alternative_identifiers	['Grave 68']
country	Ukraine
continent	Europe
region	Pontic steppe
culture	Ukraine_Eneolithic
epoch	Neolithic
group	NEUk
comment	-
latitude	48.90999984741211
longitude	33.7599983215332
sex	M
site	Dereivka
site_detail	Site I
mt_hg	U5a2b
ychr_hg	R1b1a1a2a2
year_from	-2890
year_to	-2696
date_detail	2890-2696 calBCE (4195±20 BP, PSUAMS-2828)
bp	4195±20
c14_lab_code	PSUAMS-2828
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	-
sequence_source	bam
reference	Mathieson et al. 2018. The genomic history of southeastern Europe. Nature, 555(7695), 197-203. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB22652
ychr_snps	['R:F459:18017528G->T', 'R:L1347:22818334C->T', 'R:M613:7133986G->C', 'R1:CTS2565:14366723C->T', 'R1:CTS5611:16394489T->G', 'R1:L875:16742224A->G', 'R1:P286:17716251C->T', 'R:CTS207:2810583A->G', 'R:CTS8311:17930099C->A', 'R:F82:7548900G->A', 'R:M651:9889199G->A', 'R:M718:17334694G->T', 'R1b1a1a2:L150.1:10008791C->T', 'R1b1a:CTS4244:15510064T->G', 'R1:CTS3321:14829196C->T', 'R1:P238:7771131G->A', 'R:CTS6417:16882568T->C', 'R:CTS7876:17722802G->A', 'R:CTS7880:17723850C->T', 'R:F63:7177189G->A', 'R:F652:23631629C->A', 'R:FGC1168:15667208G->C', 'R:L1225:22733758C->G', 'R:M734:18066156C->T', 'R:P227:21409706G->C', 'R:CTS2913:14561760A->G', 'R:CTS10663:22687547A->T', 'R:F765:24360964G->A', 'R1b1:L1349:22722580T->C', 'R1:CTS3123:14674176A->C', 'R1b1a1a:CTS3876:15239181G->C', 'R1b1a1a:L502:19020340G->C', 'R1b1a:L1068:21528257T->C', 'R1b1a:PF6271:23984056G->A', 'R1b:M343:2887824C->A', 'R1b1a1a:CTS5577:16376495A->C', 'R1b1a1a:CTS9018:18617596C->T', 'R:CTS9005:18611644A->T', 'R1b1a1a2:CTS11468:23124367G->T', 'R1b1a1a2:CTS12478:28590278G->A', 'R1b1a1a2:L265:8149348A->G', 'R1b1a1a2:L773:7220727A->G', 'R1b1a1a2:PF6482:18381735A->G', 'R1b1a1a2:PF6495:20828795G->A', 'R1b1a1a2:PF6509:22190371A->G', 'R1b1a1a:FGC57:7759944G->A', 'R1b1a1a:PF6463:16183412C->A', 'R1b1a:A702:10038192G->A', 'R1b1a:CTS7585:17545608G->T', 'R1b1a:PF6263:21159055C->A', 'R1b1:L822:7960019G->A', 'R1b1a1a2a2:Z2105:15747432C->A', 'R1b1a1a2:PF6494:20811307G->A', 'R1b1a1a2a2:CTS1078:7186135G->C', 'R1b1a1a2a:L23:6753511G->A', 'R1b1a1a2:CTS3575:15037433C->G', 'R1b1a1a2:PF6430:8070532T->A', 'R1b1a1a2:PF6438:9464078C->T', 'R1b1a1a:PF6459:15286480G->C', 'R1b1:PF6250:8439542G->A']
mitopathos	-