I6617
FASTA
Metadata
Reference
Data
| identifier | I6617 |
|---|---|
| alternative_identifiers | ['Hume 19A', '14612 Ind 1'] |
| country | Spain |
| continent | Europe |
| region | Iberia |
| culture | C_Iberia_CA |
| epoch | Copper Age |
| group | CAIB |
| comment | - |
| latitude | 40.220001220703125 |
| longitude | -3.759999990463257 |
| sex | M |
| site | Humanejos, Madrid |
| site_detail | - |
| mt_hg | H1+16189 |
| ychr_hg | I2a2a1b2 |
| year_from | -2900 |
| year_to | -2300 |
| date_detail | 2900-2300 BCE |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | - |
| avg_coverage | 191.63499450683594 |
| sequence_source | bam |
| reference | Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link) |
| data_link | http://www.ebi.ac.uk/ena/data/view/PRJEB23635 |
| ychr_snps | - |
| mitopathos | [{'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '3010A', 'position': 3010, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR2'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine / high altitude disease risk factor']}] |