I7042

FASTA

Metadata

Reference

Data

identifier I7042
alternative_identifiers ['HUNG496', 'grave 244']
country Hungary
continent Europe
region Pannonia
culture Hungary_BA
epoch Bronze Age
group BAHu
comment -
latitude 47.429954528808594
longitude 19.051965713500977
sex M
site Szigetszentmiklós-Üdülősor
site_detail -
mt_hg H
ychr_hg I2a1
year_from -2500
year_to -2200
date_detail 2500-2200 BCE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag -
avg_coverage 503.1820068359375
sequence_source bam
reference Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps -
mitopathos [{'allele': '16093C', 'position': 16093, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome']}, {'allele': '3236G', 'position': 3236, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-TL1'], 'diseases': ['Sporadic bilateral optic neuropathy']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}]