I7043
FASTA
Metadata
Reference
Data
| identifier | I7043 |
|---|---|
| alternative_identifiers | ['HUNG497', 'gave 119'] |
| country | Hungary |
| continent | Europe |
| region | Pannonia |
| culture | Hungary_BA |
| epoch | Bronze Age |
| group | BAHu |
| comment | - |
| latitude | 47.429954528808594 |
| longitude | 19.051965713500977 |
| sex | M |
| site | Szigetszentmiklós-Üdülősor |
| site_detail | - |
| mt_hg | H1b1 |
| ychr_hg | R1b1a1a2a1a(xR1b1a1a2a1a1,xR1b1a1a2a1a2) |
| year_from | -2500 |
| year_to | -2200 |
| date_detail | 2500-2200 BCE |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | - |
| avg_coverage | 455.9909973144531 |
| sequence_source | bam |
| reference | Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link) |
| data_link | http://www.ebi.ac.uk/ena/data/view/PRJEB23635 |
| ychr_snps | - |
| mitopathos | [{'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '3010A', 'position': 3010, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR2'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine / high altitude disease risk factor']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '3796G', 'position': 3796, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-ND1'], 'diseases': ['Adult-Onset Dystonia']}, {'allele': '6267A', 'position': 6267, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CO1'], 'diseases': ['Prostate Cancer']}] |
I7043
