I7213

FASTA

Metadata

Reference

Data

identifier I7213
alternative_identifiers ['RDVS_71/80']
country Czech Republic
continent Europe
region central Europe
culture Bell Beaker
epoch Copper Age
group BBC
comment -
latitude 50.4102668762207
longitude 14.074597358703613
sex F
site Radovesice
site_detail -
mt_hg HV+16311
ychr_hg -
year_from -2500
year_to -2200
date_detail 2500-2200 BCE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag -
avg_coverage 270.0799865722656
sequence_source bam
reference Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link)
data_link http://www.ebi.ac.uk/ena/data/view/PRJEB23635
ychr_snps -
mitopathos [{'allele': '15773A', 'position': 15773, 'status': 'Possibly synergistic', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['LHON']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}]