I7250
FASTA
Metadata
Reference
Data
| identifier | I7250 |
|---|---|
| alternative_identifiers | ['Grave 4'] |
| country | Czech Republic |
| continent | Europe |
| region | central Europe |
| culture | Bell Beaker |
| epoch | Copper Age |
| group | BBC |
| comment | - |
| latitude | 50.189998626708984 |
| longitude | 14.157999992370605 |
| sex | F |
| site | Brandýsek |
| site_detail | - |
| mt_hg | R1a1a |
| ychr_hg | - |
| year_from | -2500 |
| year_to | -2200 |
| date_detail | 2500-2200 BCE |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | - |
| avg_coverage | 43.6619987487793 |
| sequence_source | bam |
| reference | Olalde et al. 2018. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature, 555(7695), 190-196. (link) |
| data_link | http://www.ebi.ac.uk/ena/data/view/PRJEB23635 |
| ychr_snps | - |
| mitopathos | [{'allele': '1391C', 'position': 1391, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-RNR1'], 'diseases': ['found in 1 HCM patient']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}] |