KZ1

FASTA

Metadata

Reference

Data

identifier	KZ1
alternative_identifiers	['poz120']
country	Poland
continent	Europe
region	central Europe
culture	Lengyel
epoch	Neolithic
group	LDN
comment	-
latitude	52.739967346191406
longitude	18.253055572509766
sex	F
site	Krusza Zamkowa 3
site_detail	-
mt_hg	U5b2a1a
ychr_hg	-
year_from	-4332
year_to	-4066
date_detail	4332-4066 calBCE
bp	5375±35
c14_lab_code	-
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	-
sequence_source	fasta
reference	Juras et al. 2017a. Investigating kinship of Neolithic post-LBK human remains from Krusza Zamkowa, Poland using ancient DNA. Forensic Science International: Genetics, 26(?), 30-39. (link)
data_link	https://www.ncbi.nlm.nih.gov/nuccore/KX450777
ychr_snps	-
mitopathos	[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '13637G', 'position': 13637, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Possible LHON factor']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '16192T', 'position': 16192, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}]