KZ1
FASTA
Metadata
Reference
Data
identifier | KZ1 |
---|---|
alternative_identifiers | ['poz120'] |
country | Poland |
continent | Europe |
region | central Europe |
culture | Lengyel |
epoch | Neolithic |
group | LDN |
comment | - |
latitude | 52.739967346191406 |
longitude | 18.253055572509766 |
sex | F |
site | Krusza Zamkowa 3 |
site_detail | - |
mt_hg | U5b2a1a |
ychr_hg | - |
year_from | -4332 |
year_to | -4066 |
date_detail | 4332-4066 calBCE |
bp | 5375±35 |
c14_lab_code | - |
c14_sample_tag | True |
c14_layer_tag | - |
avg_coverage | - |
sequence_source | fasta |
reference | Juras et al. 2017a. Investigating kinship of Neolithic post-LBK human remains from Krusza Zamkowa, Poland using ancient DNA. Forensic Science International: Genetics, 26(?), 30-39. (link) |
data_link | https://www.ncbi.nlm.nih.gov/nuccore/KX450777 |
ychr_snps | - |
mitopathos | [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '13637G', 'position': 13637, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Possible LHON factor']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '16192T', 'position': 16192, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}] |
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KZ1