Kivutkalns194

FASTA

Metadata

Reference

Data

identifier	Kivutkalns194
alternative_identifiers	-
country	Latvia
continent	Europe
region	Baltic
culture	Late Bronze Age
epoch	Bronze Age
group	BABL
comment	-
latitude	56.85200119018555
longitude	24.27199935913086
sex	M
site	Kivutkalns, Latvia
site_detail	grave 153
mt_hg	T1a1b
ychr_hg	R1a1a
year_from	-800
year_to	-545
date_detail	800–545 calBCE
bp	2298±28
c14_lab_code	Hela-3737
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	0.15199999511241913
sequence_source	fasta
reference	Mittnik et al. 2018. The genetic prehistory of the Baltic Sea region. Nature Communications, 9(1), ?. (link)
data_link	https://www.ncbi.nlm.nih.gov/nuccore/MG429040.1
ychr_snps	-
mitopathos	[{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '4216C', 'position': 4216, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND1'], 'diseases': ['LHON / Insulin Resistance /possible adaptive high altitude variant / miscarriage']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}]