Kostenki14

Metadata

Reference

Data

identifier	Kostenki14
alternative_identifiers	['Kostenki14']
country	Russia
continent	Europe
region	Pontic steppe
culture	Hunter-Gatherer
epoch	Mesolithic
group	HGE
comment	-
latitude	51.22999954223633
longitude	39.29999923706055
sex	M
site	Kostenki
site_detail	-
mt_hg	-
ychr_hg	C1b
year_from	-36730
year_to	-34310
date_detail	36730-34310 calBCE (33250±500 BP, OxA-X-2395-15)
bp	33250±500
c14_lab_code	OxA-X-2395-15
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	-
sequence_source	<NA>
reference	Fu et al. 2016. The genetic history of Ice Age Europe. Nature, 534(7606), 200-205. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/PRJEB13123
ychr_snps	['C1:CTS6773:17100606C->T', 'C:CTS2955:14587658T->C', 'C:CTS7301:17412198T->C', 'C:CTS10720:22726491C->T', 'C:F847:6879365C->T', 'C:F1029:7629098T->C', 'C:F1804:14603298C->T', 'C:F2678:18030738C->T', 'C:F3043:19411754G->A', 'C:F3395:23031841G->A', 'C:F3703:16409159C->A', 'C:Y1767:21186558A->G', 'C:Z3958:7869808C->T', 'C:Z3974:8585701A->G', 'C:Z3986:9076205C->T', 'C:Z4099:22168468A->G', 'C:Z4139:23388830T->A', 'C:Z18049.2:21532389G->T', 'C1:F3393:23023974C->A', 'C:CTS182:2790145C->G', 'C:CTS2599:14382516C->T', 'C:CTS3223:14755880C->T', 'C:CTS3910:15257003C->G', 'C:CTS4676:15762839A->G', 'C:CTS5958:16574499A->C', 'C:CTS7752:17648352C->A', 'C:CTS8769:18186596C->T', 'C:CTS9679:19022181A->C', 'C:CTS10534:19525421C->T', 'C:CTS11544:23158264C->G', 'C:CTS11820:23294948T->C', 'C:F1044:7671399A->G', 'C:F1241:8482631G->C', 'C:F1288:8537273G->A', 'C:F1367:8640245C->G', 'C:F1727:14206892C->T', 'C:F2253:16757900C->T', 'C:F2434:17270957A->C', 'C:F2449:17341195G->T', 'C:F2606:17820514C->T', 'C:F2869:18843140C->T', 'C:F2909:18964479C->T', 'C:F2969:19182853C->G', 'C:F3319:22575539A->G', 'C:F3537:23769373A->G', 'C:F3712:17957903T->C', 'C:F3719:22937380C->A', 'C:M130:2734854C->T', 'C:Y2798:13865051G->T', 'C:Y6691:15896404A->G', 'C:Z3977:8673832C->T', 'C:Z3983:8856026G->A', 'C:Z4004:13228027G->T', 'C:Z4014:13656195T->A', 'C:Z4073:21566042C->T', 'C:Z4082:21797986T->A', 'C:Z4083:21809035G->A', 'C:Z4091:21974190T->C', 'C:Z4093:21994261G->A', 'C:Z7177:8668533C->T', 'C:CTS2377:14281450G->A', 'C:CTS3151:14685840C->T', 'C:CTS7930:17748163T->C', 'C:CTS10083:19246276T->A', 'C:CTS10707:22714249G->A', 'C:CTS10782:22775162C->A', 'C:CTS12472:28588986G->T', 'C:F2305:16871809C->A', 'C:F2803:18663706C->G', 'C:IMS-JST029149:2803297C->T', 'C:P260:17286006A->C', 'C:Y4496:8127435A->G', 'C:Z3981:8822474C->A', 'C:CTS3221:14742373C->T', 'C:CTS6203:16726281G->A', 'C:CTS6893:17175773T->C', 'C:Z4096:22113838C->A', 'C:Z7144:7310355C->T', 'C:CTS10442:19457443A->G', 'C:F1871:14954047C->T', 'C:F2774:18572332T->C', 'C:F2858:18832816T->C', 'C:F3388:23020085A->T', 'C:P255:8685038G->A', 'C:V1234:7584247G->C', 'C:V1580:8041217G->C', 'C:CTS4032:15344716A->C', 'C:CTS10271:19361507G->A', 'C:CTS2550:14359235G->A', 'C:Z4059:21291275G->A', 'C1b:F1370:8643365G->C', 'C1:K29:6630453G->T', 'C1:K35:14075931G->C', 'C:CTS179:2789035G->A', 'C:CTS4686:15769171C->T', 'C:CTS4934:15909160C->T', 'C:CTS5151:16040014T->G', 'C:CTS5383:16242575G->A', 'C:CTS5813:16490115G->Ahet', 'C:CTS6266:16780809G->Ahet', 'C:CTS10165:19301681C->A', 'C:CTS11598:23185632A->Ghet', 'C:F909:7090393C->T', 'C:F1307:8560645A->Ghet', 'C:F1743:14263271G->A', 'C:F1865:14924643G->T', 'C:F1905:15060025T->C', 'C:F1911:15097043C->Thet', 'C:F2067:16035637A->C', 'C:F2258:16768835C->T', 'C:F2446:17328425C->T', 'C:F2485:17457010C->Thet', 'C:F2501:17495224A->T', 'C:F2791:18613753C->T', 'C:F2888:18890063C->Thet', 'C:F2897:18917306T->C', 'C:F3400:23067770A->G', 'C:F3462:23553006C->Thet', 'C:F3877:8746792G->A', 'C:M216:15437564C->T', 'C:V199:2772928C->A', 'C:Y1788:7303369C->T', 'C:Y2799:21875538T->Chet', 'C:Y4481:7947749C->T', 'C:Y6693:8143636G->A', 'C:Z4081:21792125G->A', 'C:Z4090:21950315G->Thet']
mitopathos	-