LD903

FASTA

Metadata

Reference

Data

identifier	LD903
alternative_identifiers	['903K A-XVIII-11/91-I 25/IX/1964 1174~/2-I.XXII - 12 no 11752/m. H.c.r 25/06/90']
country	Portugal
continent	Europe
region	Iberia
culture	Iberia_BA
epoch	Bronze Age
group	BAIB
comment	-
latitude	41.886192321777344
longitude	-7.203676700592041
sex	U
site	Longa de Dine
site_detail	-
mt_hg	U3a1
ychr_hg	-
year_from	-2050
year_to	-1881
date_detail	4000-3831 calBP
bp	3610±40
c14_lab_code	ICA-17T/0449
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	38.29999923706055
sequence_source	fasta
reference	Gonzalez-Fortes et al. 2019. A western route of prehistoric human migration from Africa into the Iberian Peninsula. Proceedings of the Royal Society B: Biological Sciences, 286(1895), 20182288. (link)
data_link	https://www.ncbi.nlm.nih.gov/nuccore/MK321335.1
ychr_snps	-
mitopathos	[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '16390A', 'position': 16390, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['POAG - potential for association']}, {'allele': '3010A', 'position': 3010, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR2'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine / high altitude disease risk factor']}]