LHHEG61

FASTA

Metadata

Reference

Data

identifier LHHEG61
alternative_identifiers ['Heg 61']
country Hungary
continent Europe
region Pannonia
culture Longobards
epoch Middle Ages
group LONG
comment -
latitude 47.619998931884766
longitude 16.80145263671875
sex U
site Hegykő
site_detail -
mt_hg T
ychr_hg -
year_from 500
year_to 600
date_detail 500-600 CE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag -
avg_coverage 12.229999542236328
sequence_source fasta
reference Vai et al. 2019. A genetic perspective on Longobard-Era migrations. European Journal of Human Genetics, 27(4), 647-656. (link)
data_link https://www.ncbi.nlm.nih.gov/nuccore/MG182460
ychr_snps -
mitopathos [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}]