LHSZ6

FASTA

Metadata

Reference

Data

identifier	LHSZ6
alternative_identifiers	['Sz 6']
country	Hungary
continent	Europe
region	Pannonia
culture	Longobards
epoch	Middle Ages
group	LONG
comment	-
latitude	46.78821563720703
longitude	17.842775344848633
sex	U
site	Szólád
site_detail	-
mt_hg	I3
ychr_hg	-
year_from	500
year_to	600
date_detail	500-600 CE
bp	-
c14_lab_code	-
c14_sample_tag	-
c14_layer_tag	-
avg_coverage	25.969999313354492
sequence_source	fasta
reference	Vai et al. 2019. A genetic perspective on Longobard-Era migrations. European Journal of Human Genetics, 27(4), 647-656. (link)
data_link	https://www.ncbi.nlm.nih.gov/nuccore/MG182497
ychr_snps	-
mitopathos	[{'allele': '10398G', 'position': 10398, 'status': 'Reported / lineage L & M marker / also hg IJK', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND3'], 'diseases': ['PD protective factor / longevity / altered cell pH / metabolic syndrome / breast cancer risk / Leigh Syndrome risk / ADHD / cognitive decline / SCA2 age of onset / Fuchs endothelial corneal dystrophy']}, {'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '15043A', 'position': 15043, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['MDD-associated']}, {'allele': '15924G', 'position': 15924, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-TT'], 'diseases': ['LIMM']}, {'allele': '16129A', 'position': 16129, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine']}]