LRCMUS69

FASTA

Metadata

Reference

Data

identifier LRCMUS69
alternative_identifiers ['Mus 69']
country Czech Republic
continent Europe
region central Europe
culture Longobards
epoch Middle Ages
group LONG
comment -
latitude 48.89586639404297
longitude 16.59980583190918
sex U
site MuĊĦov-Roviny
site_detail -
mt_hg N1b1b1
ychr_hg -
year_from 500
year_to 600
date_detail 500-600 CE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag -
avg_coverage 168.86000061035156
sequence_source fasta
reference Vai et al. 2019. A genetic perspective on Longobard-Era migrations. European Journal of Human Genetics, 27(4), 647-656. (link)
data_link https://www.ncbi.nlm.nih.gov/nuccore/MG182449
ychr_snps -
mitopathos [{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '16390A', 'position': 16390, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['POAG - potential for association']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}, {'allele': '8836G', 'position': 8836, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ATP6'], 'diseases': ['LHON']}]