LRV_95
FASTA
Metadata
Reference
Data
identifier | LRV_95 |
---|---|
alternative_identifiers | ['F100'] |
country | Italy |
continent | Europe |
region | Southern Europe |
culture | Roman |
epoch | Classical Age |
group | ROM |
comment | - |
latitude | 40.83283615112305 |
longitude | 16.274499893188477 |
sex | U |
site | Vagnari |
site_detail | - |
mt_hg | T2j1 |
ychr_hg | - |
year_from | - |
year_to | 400 |
date_detail | 1st–4th century CE |
bp | - |
c14_lab_code | - |
c14_sample_tag | - |
c14_layer_tag | - |
avg_coverage | 128.0 |
sequence_source | reconstructed |
reference | Emery et al. 2018. Ancient Roman mitochondrial genomes and isotopes reveal relationships and geographic origins at the local and pan-Mediterranean scales. Journal of Archaeological Science: Reports, 20(?), 200-209. (link) |
data_link | https://www.ncbi.nlm.nih.gov/popset/?term=1391840729 |
ychr_snps | - |
mitopathos | [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '4216C', 'position': 4216, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND1'], 'diseases': ['LHON / Insulin Resistance /possible adaptive high altitude variant / miscarriage']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}] |