LRV_97
FASTA
Metadata
Reference
Data
| identifier | LRV_97 |
|---|---|
| alternative_identifiers | ['F126'] |
| country | Italy |
| continent | Europe |
| region | Southern Europe |
| culture | Roman |
| epoch | Classical Age |
| group | ROM |
| comment | - |
| latitude | 40.83283615112305 |
| longitude | 16.274499893188477 |
| sex | M |
| site | Vagnari |
| site_detail | - |
| mt_hg | N1a1a1a |
| ychr_hg | - |
| year_from | - |
| year_to | 400 |
| date_detail | 1st–4th century CE |
| bp | - |
| c14_lab_code | - |
| c14_sample_tag | - |
| c14_layer_tag | - |
| avg_coverage | 390.0 |
| sequence_source | reconstructed |
| reference | Emery et al. 2018. Ancient Roman mitochondrial genomes and isotopes reveal relationships and geographic origins at the local and pan-Mediterranean scales. Journal of Archaeological Science: Reports, 20(?), 200-209. (link) |
| data_link | https://www.ncbi.nlm.nih.gov/popset/?term=1391840729 |
| ychr_snps | - |
| mitopathos | [{'allele': '10398G', 'position': 10398, 'status': 'Reported / lineage L & M marker / also hg IJK', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND3'], 'diseases': ['PD protective factor / longevity / altered cell pH / metabolic syndrome / breast cancer risk / Leigh Syndrome risk / ADHD / cognitive decline / SCA2 age of onset / Fuchs endothelial corneal dystrophy']}, {'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '15043A', 'position': 15043, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['MDD-associated']}, {'allele': '3336C', 'position': 3336, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-ND1'], 'diseases': ['Carotid atherosclerosis risk']}, {'allele': '669C', 'position': 669, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR1'], 'diseases': ['DEAF']}] |
LRV_97
