NHP1

FASTA

Metadata

Reference

Data

identifier NHP1
alternative_identifiers ['poz135']
country Poland
continent Europe
region central Europe
culture Lengyel
epoch Neolithic
group LDN
comment -
latitude 50.06572341918945
longitude 20.104997634887695
sex U
site Kraków Nowa Huta Pleszów, Little Poland
site_detail -
mt_hg H5
ychr_hg -
year_from -4600
year_to -3600
date_detail 4600-3600 BCE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag -
avg_coverage -
sequence_source reconstructed
reference Chyleński et al. 2017. Late Danubian mitochondrial genomes shed light into the Neolithisation of Central Europe in the 5th millennium BC. BMC Evolutionary Biology, 17(1), ?. (link)
data_link https://www.ncbi.nlm.nih.gov/popset/1162707264
ychr_snps -
mitopathos [{'allele': '310C', 'position': 310, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CR'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '961C', 'position': 961, 'status': 'Unclear', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-RNR1'], 'diseases': ['DEAF / possibly LVNC-associated']}]