NLIAR13

FASTA

Metadata

Reference

Data

identifier	NLIAR13
alternative_identifiers	['Ar 13']
country	Italy
continent	Europe
region	southern Europe
culture	Italy_EMA
epoch	Middle Ages
group	MAIt
comment	Early Medieval
latitude	45.0728645324707
longitude	7.68797492980957
sex	U
site	Torino-Giardini Reali
site_detail	-
mt_hg	U5a1b1
ychr_hg	-
year_from	500
year_to	1000
date_detail	500-1000 CE
bp	-
c14_lab_code	-
c14_sample_tag	-
c14_layer_tag	-
avg_coverage	23.559999465942383
sequence_source	fasta
reference	Vai et al. 2019. A genetic perspective on Longobard-Era migrations. European Journal of Human Genetics, 27(4), 647-656. (link)
data_link	https://www.ncbi.nlm.nih.gov/nuccore/MG182533
ychr_snps	-
mitopathos	[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '16192T', 'position': 16192, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '16270T', 'position': 16270, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}]