OBKR_81

FASTA

Metadata

Reference

Data

identifier	OBKR_81
alternative_identifiers	['81']
country	Germany
continent	Europe
region	central Europe
culture	Early Bronze Age
epoch	Bronze Age
group	EBAGe
comment	-
latitude	48.266517639160156
longitude	10.878156661987305
sex	F
site	Königsbrunn, Obere Kreuzstraße
site_detail	-
mt_hg	X2b
ychr_hg	-
year_from	-2024
year_to	-1896
date_detail	cal BC 2024-1896
bp	3602±24
c14_lab_code	MAMS-18902
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	715.2000122070312
sequence_source	reconstructed
reference	Knipper et al. 2017. Female exogamy and gene pool diversification at the transition from the Final Neolithic to the Early Bronze Age in central Europe. Proceedings of the National Academy of Sciences, 114(38), 10083-10088. (link)
data_link	https://www.ncbi.nlm.nih.gov/popset/1240339410
ychr_snps	-
mitopathos	[{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '13708A', 'position': 13708, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND5'], 'diseases': ['LHON / Increased MS risk / higher freq in PD-ADS']}, {'allele': '16093C', 'position': 16093, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome']}, {'allele': '15927A', 'position': 15927, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['LHON / Multiple Sclerosis / DEAF1555 increased penetrance / CHD']}, {'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '8393T', 'position': 8393, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-ATP8'], 'diseases': ['Reversible brain pseudoatrophy']}]