OBKR_82

FASTA

Metadata

Reference

Data

identifier OBKR_82
alternative_identifiers ['82']
country Germany
continent Europe
region central Europe
culture Early Bronze Age
epoch Bronze Age
group EBAGe
comment -
latitude 48.266517639160156
longitude 10.878156661987305
sex F
site Königsbrunn, Obere Kreuzstraße
site_detail -
mt_hg X2b
ychr_hg -
year_from -2023
year_to -1894
date_detail cal BC 2023-1894
bp 3600±24
c14_lab_code MAMS-18903
c14_sample_tag True
c14_layer_tag -
avg_coverage 184.39999389648438
sequence_source reconstructed
reference Knipper et al. 2017. Female exogamy and gene pool diversification at the transition from the Final Neolithic to the Early Bronze Age in central Europe. Proceedings of the National Academy of Sciences, 114(38), 10083-10088. (link)
data_link https://www.ncbi.nlm.nih.gov/popset/1240339410
ychr_snps -
mitopathos [{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '13708A', 'position': 13708, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND5'], 'diseases': ['LHON / Increased MS risk / higher freq in PD-ADS']}, {'allele': '16093C', 'position': 16093, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome']}, {'allele': '15927A', 'position': 15927, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['LHON / Multiple Sclerosis / DEAF1555 increased penetrance / CHD']}, {'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '8393T', 'position': 8393, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-ATP8'], 'diseases': ['Reversible brain pseudoatrophy']}]