PCA0066

FASTA

Metadata

Reference

Data

identifier PCA0066
alternative_identifiers -
country Poland
continent Europe
region central Europe
culture Wielbark
epoch Middle Ages
group MAPl
comment -
latitude 52.59000015258789
longitude 16.780000686645508
sex M
site Kowalewko, Greater Poland
site_detail -
mt_hg H2a5
ychr_hg -
year_from 80
year_to 120
date_detail 80-110/120 CE
bp -
c14_lab_code -
c14_sample_tag True
c14_layer_tag -
avg_coverage -
sequence_source bam
reference Stolarek et al. 2018. A mosaic genetic structure of the human population living in the South Baltic region during the Iron Age. Scientific Reports, 8(1), ?. (link)
data_link https://www.ncbi.nlm.nih.gov/sra/PRJNA354503
ychr_snps -
mitopathos [{'allele': '11150A', 'position': 11150, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Found in a Multiple Sclerosis patient']}, {'allele': '13708A', 'position': 13708, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND5'], 'diseases': ['LHON / Increased MS risk / higher freq in PD-ADS']}]