Plinkaigalis242

FASTA

Metadata

Reference

Data

identifier Plinkaigalis242
alternative_identifiers -
country Lithuania
continent Europe
region Baltic
culture Corded Ware/Battle Axe
epoch Neolithic
group CWC
comment Late Neolithic
latitude 55.40999984741211
longitude 23.64699935913086
sex F
site Plinkaigalis, Lithuania
site_detail grave 241
mt_hg W6a
ychr_hg -
year_from -3260
year_to -2630
date_detail 3260–2630 calBCE
bp 4280±75
c14_lab_code OxA-5936
c14_sample_tag True
c14_layer_tag -
avg_coverage 2.5739998817443848
sequence_source fasta
reference Mittnik et al. 2018. The genetic prehistory of the Baltic Sea region. Nature Communications, 9(1), ?. (link)
data_link https://www.ncbi.nlm.nih.gov/nuccore/MG429028.1
ychr_snps -
mitopathos [{'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '16192T', 'position': 16192, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '5460A', 'position': 5460, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND2'], 'diseases': ['AD / PD / LHON']}]