Pv517

FASTA

Metadata

Reference

Data

identifier Pv517
alternative_identifiers ['PV91/517/Pala da Vella/C. inf dcho']
country Spain
continent Europe
region Iberia
culture Iberia_CA
epoch Copper Age
group CAIB
comment -
latitude 42.46523666381836
longitude -7.035059928894043
sex U
site Pala da vella, Rubia, Ourense
site_detail -
mt_hg K2b1
ychr_hg -
year_from -3354
year_to -3090
date_detail 5304-5040 calBP
bp 4500±35
c14_lab_code GrN-19395
c14_sample_tag True
c14_layer_tag -
avg_coverage 145.60000610351562
sequence_source fasta
reference Gonzalez-Fortes et al. 2019. A western route of prehistoric human migration from Africa into the Iberian Peninsula. Proceedings of the Royal Society B: Biological Sciences, 286(1895), 20182288. (link)
data_link https://www.ncbi.nlm.nih.gov/nuccore/MK321345.1
ychr_snps -
mitopathos [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '13135A', 'position': 13135, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['possible HCM susceptibility']}, {'allele': '146C', 'position': 146, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Absence of Endometriosis']}, {'allele': '9055A', 'position': 9055, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ATP6'], 'diseases': ['PD protective factor']}]