RISE1161
FASTA
Metadata
Reference
Data
identifier | RISE1161 |
---|---|
alternative_identifiers | ['ERS2696718'] |
country | Poland |
continent | Europe |
region | central Europe |
culture | Globular Amphora |
epoch | Neolithic |
group | GAC |
comment | - |
latitude | 50.1775016784668 |
longitude | 20.5130558013916 |
sex | F |
site | Koszyce |
site_detail | site 3 |
mt_hg | H27+16093 |
ychr_hg | - |
year_from | -2880 |
year_to | -2776 |
date_detail | 2880-2776 BCE |
bp | 4230±36 |
c14_lab_code | KF1242 |
c14_sample_tag | True |
c14_layer_tag | - |
avg_coverage | 1.2999999523162842 |
sequence_source | bam |
reference | Schroeder et al. 2019. Unraveling ancestry, kinship, and violence in a Late Neolithic mass grave. Proceedings of the National Academy of Sciences, 116(22), 10705-10710. (link) |
data_link | https://www.ebi.ac.uk/ena/data/view/SAMEA4877751 |
ychr_snps | - |
mitopathos | [{'allele': '16093C', 'position': 16093, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome']}, {'allele': '16129A', 'position': 16129, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine']}, {'allele': '4440A', 'position': 4440, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-TM'], 'diseases': ['Mitochondrial myopathy']}] |