RISE408

FASTA

Metadata

Reference

Data

identifier	RISE408
alternative_identifiers	['#6']
country	Armenia
continent	Asia
region	Caucasus
culture	Lchashen-Metsamor
epoch	Iron Age
group	IACA
comment	Early Iron Age, updated according to Margaryan et al. 2017
latitude	40.150001525878906
longitude	45.86000061035156
sex	M
site	Norabak
site_detail	-
mt_hg	I5c
ychr_hg	J
year_from	-1209
year_to	-1009
date_detail	1209-1009 calBCE (2908±32 BP, UBA-27939)
bp	2908±32
c14_lab_code	UBA-27939
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	103.0
sequence_source	fasta
reference	Allentoft et al. 2015. Population genomics of Bronze Age Eurasia. Nature, 522(7555), 167-172. (link)
data_link	https://www.ncbi.nlm.nih.gov/nuccore/MF362739
ychr_snps	-
mitopathos	[{'allele': '10398G', 'position': 10398, 'status': 'Reported / lineage L & M marker / also hg IJK', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND3'], 'diseases': ['PD protective factor / longevity / altered cell pH / metabolic syndrome / breast cancer risk / Leigh Syndrome risk / ADHD / cognitive decline / SCA2 age of onset / Fuchs endothelial corneal dystrophy']}, {'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '15043A', 'position': 15043, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['MDD-associated']}, {'allele': '15924G', 'position': 15924, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-TT'], 'diseases': ['LIMM']}, {'allele': '16129A', 'position': 16129, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine']}]