RISE408

FASTA

Metadata

Reference

Data

identifier RISE408
alternative_identifiers ['#6']
country Armenia
continent Asia
region Caucasus
culture Lchashen-Metsamor
epoch Iron Age
group IACA
comment Early Iron Age, updated according to Margaryan et al. 2017
latitude 40.150001525878906
longitude 45.86000061035156
sex M
site Norabak
site_detail -
mt_hg I5c
ychr_hg J
year_from -1209
year_to -1009
date_detail 1209-1009 calBCE (2908±32 BP, UBA-27939)
bp 2908±32
c14_lab_code UBA-27939
c14_sample_tag True
c14_layer_tag -
avg_coverage 103.0
sequence_source fasta
reference Allentoft et al. 2015. Population genomics of Bronze Age Eurasia. Nature, 522(7555), 167-172. (link)
data_link https://www.ncbi.nlm.nih.gov/nuccore/MF362739
ychr_snps -
mitopathos [{'allele': '10398G', 'position': 10398, 'status': 'Reported / lineage L & M marker / also hg IJK', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND3'], 'diseases': ['PD protective factor / longevity / altered cell pH / metabolic syndrome / breast cancer risk / Leigh Syndrome risk / ADHD / cognitive decline / SCA2 age of onset / Fuchs endothelial corneal dystrophy']}, {'allele': '12705T', 'position': 12705, 'status': 'Reported', 'homoplasmy': '<NA>', 'heteroplasmy': '<NA>', 'locus': ['MT-CO1'], 'diseases': ['Possible protective factor for normal tension glaucoma']}, {'allele': '15043A', 'position': 15043, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['MDD-associated']}, {'allele': '15924G', 'position': 15924, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-TT'], 'diseases': ['LIMM']}, {'allele': '16129A', 'position': 16129, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Cyclic Vomiting Syndrome with Migraine']}]