RISE412

FASTA

Metadata

Reference

Data

identifier	RISE412
alternative_identifiers	['#10']
country	Armenia
continent	Asia
region	Caucasus
culture	Lchashen-Metsamor
epoch	Iron Age
group	IACA
comment	Early Iron Age, updated according to Margaryan et al. 2017
latitude	40.380001068115234
longitude	45.18000030517578
sex	F
site	Noratus
site_detail	-
mt_hg	U4c1
ychr_hg	-
year_from	-1193
year_to	-945
date_detail	1193-945 calBCE (2885±31 BP, UBA-27940)
bp	2885±31
c14_lab_code	UBA-27940
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	268.8999938964844
sequence_source	fasta
reference	Allentoft et al. 2015. Population genomics of Bronze Age Eurasia. Nature, 522(7555), 167-172. (link)
data_link	https://www.ncbi.nlm.nih.gov/nuccore/MF362740
ychr_snps	-
mitopathos	[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '15693C', 'position': 15693, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['Possibly LVNC cardiomyopathy-associated']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '499A', 'position': 499, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Endometriosis']}]