RISE412
FASTA
Metadata
Reference
Data
| identifier | RISE412 |
|---|---|
| alternative_identifiers | ['#10'] |
| country | Armenia |
| continent | Asia |
| region | Caucasus |
| culture | Lchashen-Metsamor |
| epoch | Iron Age |
| group | IACA |
| comment | Early Iron Age, updated according to Margaryan et al. 2017 |
| latitude | 40.380001068115234 |
| longitude | 45.18000030517578 |
| sex | F |
| site | Noratus |
| site_detail | - |
| mt_hg | U4c1 |
| ychr_hg | - |
| year_from | -1193 |
| year_to | -945 |
| date_detail | 1193-945 calBCE (2885±31 BP, UBA-27940) |
| bp | 2885±31 |
| c14_lab_code | UBA-27940 |
| c14_sample_tag | True |
| c14_layer_tag | - |
| avg_coverage | 268.8999938964844 |
| sequence_source | fasta |
| reference | Allentoft et al. 2015. Population genomics of Bronze Age Eurasia. Nature, 522(7555), 167-172. (link) |
| data_link | https://www.ncbi.nlm.nih.gov/nuccore/MF362740 |
| ychr_snps | - |
| mitopathos | [{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '15693C', 'position': 15693, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['Possibly LVNC cardiomyopathy-associated']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '499A', 'position': 499, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Endometriosis']}] |
RISE412
