identifier RISE423
alternative_identifiers ['#21']
country Armenia
continent Asia
region Caucasus
culture Lchashen-Metsamor
epoch Bronze Age
group BACA
comment Late Bronze Age, updated according to Margaryan et al. 2017
latitude 40.150001525878906
longitude 45.25
sex M
site Nerqin Getashen
site_detail -
mt_hg T2a3
ychr_hg E1b1b1b2a
year_from -1402
year_to -1211
date_detail 1402-1211 calBCE (3038±32 BP, UBA-27944)
bp 3038±32
c14_lab_code UBA-27944
c14_sample_tag True
c14_layer_tag -
avg_coverage 133.1999969482422
sequence_source fasta
reference Allentoft et al. 2015. Population genomics of Bronze Age Eurasia. Nature, 522(7555), 167-172. (link)
data_link https://www.ncbi.nlm.nih.gov/nuccore/MF362743
ychr_snps -
mitopathos [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}, {'allele': '195C', 'position': 195, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['BD-associated / melanoma pts']}, {'allele': '4216C', 'position': 4216, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND1'], 'diseases': ['LHON / Insulin Resistance /possible adaptive high altitude variant / miscarriage']}, {'allele': '4917G', 'position': 4917, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['LHON / Insulin Resistance / AMD / NRTI-PN']}]