RISE431
FASTA
Metadata
Reference
Data
| identifier | RISE431 |
|---|---|
| alternative_identifiers | ['Barrow 4', 'skeleton 2'] |
| country | Poland |
| continent | Europe |
| region | central Europe |
| culture | Corded Ware |
| epoch | Neolithic |
| group | CWC |
| comment | Corded Ware or Proto Unetice |
| latitude | 52.13999938964844 |
| longitude | 16.540000915527344 |
| sex | M |
| site | Leki Male |
| site_detail | - |
| mt_hg | T2e |
| ychr_hg | R1b1a |
| year_from | -2286 |
| year_to | -2048 |
| date_detail | 2286-2048 calBCE (3762±27 BP, OxA-27967) |
| bp | 3762±27 |
| c14_lab_code | OxA-27967 |
| c14_sample_tag | True |
| c14_layer_tag | - |
| avg_coverage | - |
| sequence_source | bam |
| reference | Allentoft et al. 2015. Population genomics of Bronze Age Eurasia. Nature, 522(7555), 167-172. (link) |
| data_link | https://www.ebi.ac.uk/ena/data/view/PRJEB9021 |
| ychr_snps | ['R1b1a:L754:22889018G->A', 'R1:CTS997:7132713G->A', 'R:CTS7876:17722802G->A', 'R:L1225:22733758C->G', 'R1:CTS3123:14674176A->C'] |
| mitopathos | [{'allele': '11251G', 'position': 11251, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-ND4'], 'diseases': ['Reduced risk of PD']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '15928A', 'position': 15928, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-TT'], 'diseases': ['Multiple Sclerosis / idiopathic repeat miscarriage / AD protection']}] |