SCY009

FASTA

Metadata

Reference

Data

identifier	SCY009
alternative_identifiers	['9']
country	Ukraine
continent	Europe
region	Pontic steppe
culture	Scythian
epoch	Iron Age
group	SCU
comment	-
latitude	47.37555694580078
longitude	33.375
sex	M
site	Starosillya
site_detail	-
mt_hg	J2b1a6
ychr_hg	-
year_from	-700
year_to	-700
date_detail	700 BCE
bp	-
c14_lab_code	-
c14_sample_tag	-
c14_layer_tag	-
avg_coverage	-
sequence_source	reconstructed
reference	Juras et al. 2017b. Diverse origin of mitochondrial lineages in Iron Age Black Sea Scythians. Scientific Reports, 7(1), ?. (link)
data_link	https://www.ncbi.nlm.nih.gov/popset/1160417854
ychr_snps	-
mitopathos	[{'allele': '10398G', 'position': 10398, 'status': 'Reported / lineage L & M marker / also hg IJK', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND3'], 'diseases': ['PD protective factor / longevity / altered cell pH / metabolic syndrome / breast cancer risk / Leigh Syndrome risk / ADHD / cognitive decline / SCA2 age of onset / Fuchs endothelial corneal dystrophy']}, {'allele': '13708A', 'position': 13708, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND5'], 'diseases': ['LHON / Increased MS risk / higher freq in PD-ADS']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '15257A', 'position': 15257, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['LHON']}, {'allele': '15662G', 'position': 15662, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CYB'], 'diseases': ['Complex mitochondriopathy-associated']}, {'allele': '15812A', 'position': 15812, 'status': 'Reported / Secondary', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CYB'], 'diseases': ['LHON']}, {'allele': '295T', 'position': 295, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Low VO2max response']}, {'allele': '489C', 'position': 489, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Low VO2max response']}, {'allele': '9016G', 'position': 9016, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-ATP6'], 'diseases': ['LHON']}]