SCY012

FASTA

Metadata

Reference

Data

identifier	SCY012
alternative_identifiers	['12']
country	Ukraine
continent	Europe
region	Pontic steppe
culture	Scythian
epoch	Iron Age
group	SCU
comment	-
latitude	48.53329849243164
longitude	28.75
sex	U
site	Vapnyarka
site_detail	-
mt_hg	U5b2a1a2
ychr_hg	-
year_from	-400
year_to	-300
date_detail	400-300 BCE
bp	-
c14_lab_code	-
c14_sample_tag	-
c14_layer_tag	-
avg_coverage	-
sequence_source	reconstructed
reference	Juras et al. 2017b. Diverse origin of mitochondrial lineages in Iron Age Black Sea Scythians. Scientific Reports, 7(1), ?. (link)
data_link	https://www.ncbi.nlm.nih.gov/popset/1160417854
ychr_snps	-
mitopathos	[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '13637G', 'position': 13637, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Possible LHON factor']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '15924G', 'position': 15924, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-TT'], 'diseases': ['LIMM']}, {'allele': '5452T', 'position': 5452, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND2'], 'diseases': ['Progressive Encephalomyopathy']}]