SCY308

FASTA

Metadata

Reference

Data

identifier SCY308
alternative_identifiers ['pos308']
country Moldova
continent Europe
region Pontic steppe
culture Scythian
epoch Iron Age
group SCU
comment -
latitude 46.66999816894531
longitude 29.809999465942383
sex U
site Glinoe
site_detail -
mt_hg F1d
ychr_hg -
year_from -400
year_to -200
date_detail 400-200 BCE
bp -
c14_lab_code -
c14_sample_tag -
c14_layer_tag -
avg_coverage -
sequence_source reconstructed
reference Juras et al. 2017b. Diverse origin of mitochondrial lineages in Iron Age Black Sea Scythians. Scientific Reports, 7(1), ?. (link)
data_link https://www.ncbi.nlm.nih.gov/popset/1160417854
ychr_snps -
mitopathos [{'allele': '146C', 'position': 146, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Absence of Endometriosis']}, {'allele': '16189C', 'position': 16189, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CR'], 'diseases': ['Diabetes / Cardiomyopathy /cancer risk / mtDNA copy nbr / Metabolic Syndrome / Melanoma patients']}, {'allele': '5460A', 'position': 5460, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-ND2'], 'diseases': ['AD / PD / LHON']}, {'allele': '5628C', 'position': 5628, 'status': 'Reported', 'homoplasmy': '-', 'heteroplasmy': '+', 'locus': ['MT-TA'], 'diseases': ['CPEO / DEAF enhancer / gout']}, {'allele': '6962A', 'position': 6962, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-CO1'], 'diseases': ['Possible helper variant for 15927A']}]