STR_328

FASTA

Metadata

Reference

Data

identifier	STR_328
alternative_identifiers	['SAMEA104354410']
country	Germany
continent	Europe
region	central Europe
culture	Ostrogothic
epoch	Middle Ages
group	MAGe
comment	-
latitude	48.87327575683594
longitude	12.553182601928711
sex	F
site	Straubing-Bajuwarenstraße
site_detail	2 bow brooches, 2 eagle brooches, beads, chatelaine
mt_hg	U5a1h
ychr_hg	-
year_from	350
year_to	530
date_detail	350 – 367 cal AD, 380 – 432 cal AD, 491 – 530 cal AD, 480 – 510 AD
bp	1635±19
c14_lab_code	-
c14_sample_tag	True
c14_layer_tag	-
avg_coverage	192.3300018310547
sequence_source	bam
reference	Veeramah et al. 2018. Population genomic analysis of elongated skulls reveals extensive female-biased immigration in Early Medieval Bavaria. Proceedings of the National Academy of Sciences, 115(13), 3494-3499. (link)
data_link	https://www.ebi.ac.uk/ena/data/view/SAMEA104354410
ychr_snps	-
mitopathos	[{'allele': '11467G', 'position': 11467, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND4'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '12308G', 'position': 12308, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-TL2'], 'diseases': ['CPEO / Stroke / CM / Breast & Renal & Prostate Cancer Risk / Altered brain pH /sCJD']}, {'allele': '12372A', 'position': 12372, 'status': 'Reported', 'homoplasmy': '+', 'heteroplasmy': '-', 'locus': ['MT-ND5'], 'diseases': ['Altered brain pH / sCJD patients']}, {'allele': '150T', 'position': 150, 'status': 'Conflicting reports', 'homoplasmy': '+', 'heteroplasmy': '+', 'locus': ['MT-CR'], 'diseases': ['Longevity / Cervical Carcinoma / HPV infection risk']}, {'allele': '16192T', 'position': 16192, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}, {'allele': '16270T', 'position': 16270, 'status': 'Reported', 'homoplasmy': 'nr', 'heteroplasmy': 'nr', 'locus': ['MT-CR'], 'diseases': ['Melanoma patients']}]